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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913121.1_cds_XP_016463182.1_56327
CDS Infomation

[gene=LOC107786249] [db_xref=GeneID:107786249] [protein=caffeic acid 3-O-methyltransferase-like] [protein_id=XP_016463182.1] [location=complement(join(26081..26380,26898..26962,27082..27392,27807..28219))] [gbkey=CDS]
Sequence

ATGGACATGGCTTTATCCATGGATAAAATTGTTATATCCAATGAAGAGGAAAATTCAATG
ATGAAGGCTATGCATCTTCCTACTGGTTTATTCCTTAACATGGTTTTGAAAACTGCGATT
GAACTTGGCTTGTTTGAGATCATAGCAAAAGCAAATAGTGAATTATCTTCCTATGAAATT
GCATCTCAACTTCCCACAAAAAACCCTAATGCCCCACTTGTTCTTGAAAGGATACTAAGG
TTTCTTGCTAGCCAATCTTTTCTCACTTCCAACATTTCCAAGGATGATGATGGACACATT
CACACATCATACAATTTGACACCTTTGAGCAAAAGCTTCATCTCCGATAAAGACGGATCA
TCGTCTGCTCCTTTTTTACTACTGACCACTGATCCTGTAGCTGTTAATTCCTGGTTTCAT
TTGAAAGATGCAATTCTAGAGGGTGAAATACCATTCAACAAGGCTCATGGAATGAATGCA
TTTGAATACCATGGAAAAGATAGTAGATTGAATATGGTGTTCAATAAAGCTATGCAAAAC
ATCTCTTCTATTGAAATGAAGAGATTACTTGAGTCTTACACTGGCTTCCAAGGAGTAAAA
GAGGCAATAGATGTGGGAGGTGGACTTGGGGTATCATTAGCTTCTATAATTTCCAAGTAT
CCTAATATCAAAGGTATTAATTTTGACCTACCCCATGTCATCAAAGATGCTCCTACCTAT
GCAGGCATAGAGCATGTTGGAGGAGATATGTTTAAGAGCATTCCTAAAGGGGAGGTAATC
ATTCTGAAGGCGATACTTCATGATTGGGATGATGATCATTGCCTGAAAATCTTGAAGAAT
TGTTGGGGAGCTTTGCCAGAAAATGGGAAGGTTGTGGTAATAGAACAAATACAGCCAGAA
TATCCAGAGACTAATCTTCTTTCTAAGCATTCATTTAGTACTGATATGTTAATGATTACT
ATGCTTAATGGAGGAAAGGAAAGGACAAAACAAGAATTTGAAGCTTTAGCAAAAGAAGCT
GGATTTTCTGCTCTTAAAATTGCATGTCGTGCATATTATTGTTGGGTCATGGAATTGCAC
AGATGTTAG

Peptide Sequence

PEP ID

XP_016463182.1
PEP Infomation

PREDICTED: caffeic acid 3-O-methyltransferase-like [Nicotiana tabacum]
Sequence

MDMALSMDKIVISNEEENSMMKAMHLPTGLFLNMVLKTAIELGLFEIIAKANSELSSYEI
ASQLPTKNPNAPLVLERILRFLASQSFLTSNISKDDDGHIHTSYNLTPLSKSFISDKDGS
SSAPFLLLTTDPVAVNSWFHLKDAILEGEIPFNKAHGMNAFEYHGKDSRLNMVFNKAMQN
ISSIEMKRLLESYTGFQGVKEAIDVGGGLGVSLASIISKYPNIKGINFDLPHVIKDAPTY
AGIEHVGGDMFKSIPKGEVIILKAILHDWDDDHCLKILKNCWGALPENGKVVVIEQIQPE
YPETNLLSKHSFSTDMLMITMLNGGKERTKQEFEALAKEAGFSALKIACRAYYCWVMELH
RC

Transcript Sequence

Gene sequence data has not been registered.